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| Status |
Public on Jan 09, 2014 |
| Title |
Genome-wide analysis of K3K27ac, H2AZ and methylation data in mouse embryonic stem cells |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
|
| Summary |
We generated two types 5-methylcytosine (5-mC) data in E14 mouse embryonic stem cells, using methylated DNA immunoprecipitation followed by sequencing (MeDIP-seq) and DNA digestion by methyl-sensitive restriction enzymes followed by sequencing (MRE-seq).
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| |
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| Overall design |
Examination of 2 histone modifications and methylation in mouse embryonic stem cells
|
| |
|
| Contributor(s) |
Chen C, Xiao S, Xing X, Song C, Xie D, Xao X, McDee D, Wang T, He C, Zhong S |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jan 09, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Chieh-Chun Chen |
| E-mail(s) |
cchen63@illinois.edu
|
| Organization name |
University of illinois
|
| Department |
Bioengineering
|
| Street address |
1206 West Gregory Drive
|
| City |
Urbana |
| State/province |
Illinois |
| ZIP/Postal code |
61801 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
| GPL15103 |
Illumina HiSeq 1000 (Mus musculus) |
|
| Samples (5)
|
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| Relations |
| SRA |
SRP010189 |
| BioProject |
PRJNA150957 |
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