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Series GSE37001 Query DataSets for GSE37001
Status Public on Apr 25, 2012
Title METTL3 KD in HepG2 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To gain insight into possible processes that require m6A for their function, METTL3 was knocked down (KD) in HepG2 cells by siRNA transfections
 
Overall design Differential expression analysis of METTL3 KD versus mock-transfected HepG2 cells, in 2 biological replicates
 
Contributor(s) Dominissini D, Moshitch-Moshkovitz S, Schwartz S, Salmon-Divon M, Cesarkas K, Rechavi G
Citation(s) 22575960
Submission date Apr 03, 2012
Last update date May 15, 2019
Contact name Sharon Moshitch-Moshkovitz
E-mail(s) sharon.moshkovitz@sheba.health.gov.il
Organization name Sheba Medical Center
Department Cancer Research Center
Street address Laboratory wing
City Tel-Hashomer
ZIP/Postal code 52621
Country Israel
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (4)
GSM908325 METTL3_KD1
GSM908326 METTL3_KD2
GSM908327 Mock_control1
This SubSeries is part of SuperSeries:
GSE37005 Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
Relations
BioProject PRJNA158107
SRA SRP012096

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE37001_DEexons.txt.gz 25.4 Kb (ftp)(http) TXT
GSE37001_DEgenes.txt.gz 127.3 Kb (ftp)(http) TXT
GSE37001_DEintrons.txt.gz 123.2 Kb (ftp)(http) TXT
GSE37001_DEisoforms.txt.gz 189.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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