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Series GSE3702 Query DataSets for GSE3702
Status Public on Mar 30, 2006
Title Early gene expression responses to a Salmonella infection in the chicken intestine
Organism Gallus gallus
Experiment type Expression profiling by array
Summary 1-day old chickens were orally inoculated with 1e5 c.f.u. Salmonella enteritidis. 24 hours after infection RNA from the jejunum was analysed. Two different microarray platforms were used, a homemade cDNA microarray and the Affymetrix GeneChip Chicken Genome Array
Keywords: host response; genetic background
 
Overall design There were 4 groups, 5 animals each. The microarray hybridisations were performed with pooled RNA samples.
4 comparisions were done:
-control fast growing chicken line vs. salmonella fast growing chicken line
-control slow growing chicken line vs. salmonella slow growing chicken line
-control fast growing chicken line vs. control slow growing chicken line
-salmonella fast growing chicken line vs. salmonella slow growing chicken line
 
Contributor(s) van Hemert S, Hoekman AJ, Smits MA, Rebel JM
Citation Van Hemert S., Hoekman A.J., Smits M.A., Rebel J.M.J., Early host gene expression responses to a Salmonella infection in the intestine of chickens with different genetic background examined with cDNA and oligonucleotide microarrays, Comp. Biochem. Physiol. D (2006) 1:292-299.
Submission date Nov 30, 2005
Last update date Mar 16, 2012
Contact name Saskia van Hemert
E-mail(s) saskia.vanhemert@wur.nl
Organization name Animal Sciences Group
Street address PO box 65
City Lelystad
ZIP/Postal code 8200 AB
Country Netherlands
 
Platforms (2)
GPL2719 intestine-spleen combined array
GPL3213 [Chicken] Affymetrix Chicken Genome Array
Samples (12)
GSM67274 day 1 slide 1
GSM67275 day 1 slide 2
GSM67276 day 1 slide 3
Relations
BioProject PRJNA93855

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Supplementary data files not provided

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