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Series GSE37871 Query DataSets for GSE37871
Status Public on Dec 17, 2012
Title Expression profiling in primary embryonic fibroblasts deficient for the N-terminal truncation of Lats1
Organism Mus musculus
Experiment type Expression profiling by array
Summary Lats1 and Lats2 are the mediators of the Hippo pathway that regulates tissue growth and proliferation. Lats1 and Lats2 kinases share 85% sequence identity in the kinase domain. However, their non-kinase regions at the N-terminus are distinct except for Lats conserved domain 1 (LCD1) and LCD2, suggesting that their N-terminal regions are important for Lats1/2-specific functions. In this study, we generated Lats1 knockout mice disrupting the N-terminal region containing LCD1 (Lats1ΔN/ΔN). We show that some Lats1ΔN/ΔN mice were born safely and grew normally. However, mouse embryonic fibroblasts (MEFs) from Lats1ΔN/ΔN mice displayed drastic defects in mitosis, showing enhanced centrosome overduplication, chromosomal misalignment, multipolar spindle formation, chromosome bridging, and cytokinesis failure. Moreover, they displayed accelerated cell cycle and cell growth bypassing a cell-cell contact inhibition like tumor cells, and exhibited anchorage independent growth. Indeed, Lats1ΔN/ΔN MEFs produced tumors in nude mice after subcutaneous injection, although the tumor growth rate was much slower than ordinary cancer cells. Furthermore, Yap, the key transcriptional co-activator in the Hippo pathway, was overexpressed and retained stable in Lats1ΔN/ΔN MEFs under high cell density, and expression of Lats2 mRNA were down-regulated.
 
Overall design Total RNAs were extracted from MEFs under high or low cell density using miRNeasy extraction kit (Qiagen). A Dye-swapped experiment was performed by hybridizing complimentary RNA (cRNA) labeled with either Cyanine (Cy) -3 or Cy-5 (Perkin-Elmer) onto Whole Mouse Genome Oligo Microarray (G4122F; Agilent Technologies). Co-hybridizations were performed and data from Cy3 or Cy5 channels were analyzed as normalized signal intensities rather than as log ratios corresponding to each array.
 
Contributor(s) Okuzaki D, Nojima H
Citation(s) 23230145
Submission date May 09, 2012
Last update date May 10, 2018
Contact name Daisuke Okuzaki
E-mail(s) dokuzaki@biken.osaka-u.ac.jp
Phone +81-6-6879-4935
Organization name Osaka univ.
Department Immunology Frontier Research Center
Lab Human Immunology (Single Cell Genomics)
Street address Yamadaoka 3-1
City Suita
State/province Osaka
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL4134 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version)
Samples (8)
GSM929223 WT-low_Cy3
GSM929224 WT-high_Cy5
GSM929225 WT-high_Cy3
Relations
BioProject PRJNA164681

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE37871_RAW.tar 6.6 Mb (http)(custom) TAR
GSE37871_WT-high_Cy3_vs_WT-low_Cy5_dyeswap.txt.gz 14.2 Mb (ftp)(http) TXT
GSE37871_WT-low_Cy3_vs_WT-high_Cy5.txt.gz 14.2 Mb (ftp)(http) TXT
GSE37871_delN-high_Cy3_vs_delN-low_Cy5_dyeswap.txt.gz 14.3 Mb (ftp)(http) TXT
GSE37871_delN-low_Cy3_vs_delN-high_Cy5.txt.gz 14.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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