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Series GSE38052 Query DataSets for GSE38052
Status Public on Aug 09, 2012
Title Genome-wide transcriptional effects of Pregnancy-Induced Non-coding RNA (PINC)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Pregnancy-Induced Non-Coding RNA (PINC) is upregulated in alveolar cells of the mammary gland during pregnancy and persist in alveolar cells that remain in the regressed lobules following involution. Here, we show that in the post-pubertal mouse mammary gland, mPINC expression increases throughout pregnancy and then declines in early lactation, when alveolar cells undergo terminal differentiation. Accordingly, mPINC expression is significantly decreased when HC11 mammary epithelial cells are induced to differentiate and produce milk proteins. This natural reduction in mPINC levels may be necessary for lactation, as overexpression of mPINC in HC11 cells blocks lactogenic differentiation, while knockdown of mPINC enhances differentiation.
 
Overall design HC11 mammary epithelial cells, with or without knockdown or over-expression of PINC, and with or without treatment by differentiation-inducing agents, were profiled for gene expression.
 
Contributor(s) Creighton C, Shore A, Rosen J
Citation(s) 22911650
Submission date May 18, 2012
Last update date Jul 19, 2017
Contact name Chad Creighton
E-mail(s) creighto@bcm.tmc.edu
Organization name Baylor College of Medicine
Department Biostatistics, Ducan Cancer Center
Street address One Baylor Plaza, Mail Stop: BCM305
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (24)
GSM933034 siNegative (no differentiation) 1
GSM933035 siNegative (no differentiation) 2
GSM933036 siPINC1/6 (no differentiation) 1
Relations
BioProject PRJNA167131

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38052_RAW.tar 84.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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