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Series GSE3808 Query DataSets for GSE3808
Status Public on May 01, 2006
Title Complete embryonic metanephric kidney analysis of wild type and Hoxa11, Hoxd11 null targeted mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Complete (whole) embryonic kidneys were dissected from wild type and Hoxa11, Hoxd11 compound null embryons throughout development. Targets from two biological replicates of each were generated and the expression profiles were determined using Affymetrix MOE430A and MOE430B arrays. Comparisons between normal and mutant and comparisons of development samples identified global patterns of gene regulation in kidney development
Keywords: embryonic metanephric kidney, kidney development, Hoxa11, Hoxd11, compound null targeted mice
 
Overall design Embryonic metanephric kidney samples throughout development were analyzed based on normalization to adult kidney samples. In addition, Hoxa11, Hoxd11 compound null embronic kidneys were normalized to wild type embryonic controls. All developmental and adult stages were represented in biological (seperate embryo/animal replicate)
 
Contributor(s) Schwab K, Potter SS
Citation(s) 16581055
Submission date Dec 12, 2005
Last update date Jan 08, 2019
Contact name Kristopher Robert Schwab
E-mail(s) kristopher.schwab@cchmc.org
Organization name Cincinnati Children's Hospital Research Foundation
Department Developmental Biology
Lab S. Steven Potter
Street address 3333 Burnett Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platforms (2)
GPL339 [MOE430A] Affymetrix Mouse Expression 430A Array
GPL340 [MOE430B] Affymetrix Mouse Expression 430B Array
Samples (28)
GSM87379 Adult kidney rep 1 (430A)
GSM87380 Hoxa11, Hoxd11 null E12.5 kidney rep 1 (430A)
GSM87381 Hoxa11, Hoxd11 null E12.5 kidney rep 2 (430A)
Relations
BioProject PRJNA94011

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE3808_RAW.tar 94.6 Mb (http)(custom) TAR (of CEL, EXP)
Raw data provided as supplementary file

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