NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE38221 Query DataSets for GSE38221
Status Public on May 25, 2012
Title Genome wide expression analysis of the Hypothalamic control of Mammalian Puberty
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Gene expression analysis of hypothalami from female animals at different juvenil developmental reproductive stages. Results provide insight into the role of the hypothalamus in controlling the onset of puberty.
 
Overall design SD rats were housed (4/cage) in a controlled environment and euthanized at different ages (Early Juvenile: 21 days, Juvenile: 26 days, Late Juvenile: 29 days, Early Proestrus (before ovulation): 29-31 days, Late Proestus (the day of first ovulation): 31 days. Rats were anesthetized and brains were rapidly removed. The hypothalamus was dissected away from the rest of the brain and flash frozen. Total RNA was isolated from each sample using Qiagen's RNeasy Mini Kit (Valencia, CA). Samples were bioanalyzed on a RNA 6000 Nano chip kit to check for integrity and concentration before sending it to the GMSR-Illumina-Core.
 
Contributor(s) Lomniczi A, Ojeda SR
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 24, 2012
Last update date Jul 29, 2014
Contact name Alejandro Lomniczi
E-mail(s) lomniczi@ohsu.edu
Phone 503-690-5305
Fax 503-690-5384
Organization name Oregon National Primate Research Center - OHSU
Department Neuroscience
Street address 505 NW 185th Ave
City Beaverton
State/province OR
ZIP/Postal code 97006
Country USA
 
Platforms (1)
GPL6101 Illumina ratRef-12 v1.0 expression beadchip
Samples (24)
GSM936913 Hypothalamus early juvenile 164
GSM936914 Hypothalamus early juvenile 165
GSM936915 Hypothalamus early juvenile 166
Relations
BioProject PRJNA167509

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38221_RAW.tar 2.8 Mb (http)(custom) TAR
GSE38221_non-normalized.txt.gz 3.4 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap