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Series GSE38227 Query DataSets for GSE38227
Status Public on May 22, 2013
Title Activation of TGF-beta pathway by areca nut constituents: A possible cause of Oral submucous fibrosis.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To understand the role of areca nut constituents in manifestation of Oral submucous fibrosis, we studied gene expression profile in epithelial cells following areca nut water extract treatment. A comaprison with TGF-beta induced gene expression changes were performed as epithelial cells were predicted to be source of TGF-beta.
 
Overall design Control Vs Areca nut 5 ug/ml water extract (5H) (2), Contro Vs TGF-beta (2), Control Vs ALK5 (TbetaRI inhibitor) (2), Control Vs 5H + ALK5 inhibitor (2). (2)- Biological duplicates.
 
Contributor(s) Khan I, Kumar N, Narra S, Kondaiah P
Citation(s) 23284772
Submission date May 24, 2012
Last update date Feb 22, 2018
Contact name Neeraj KUMAR
E-mail(s) neerajrana14@gmail.com, paturu@mrdg.iisc.ernet.in
Organization name Indian Institute of Science Bangalore
Department MRDG
Lab Prof. P Kondaiah lab
Street address Indian Institute of Science Bangalore
City Bangalore
ZIP/Postal code 560 012
Country India
 
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (8)
GSM937034 5H rep1
GSM937035 5H rep2
GSM937036 TGFbeta rep1
Relations
BioProject PRJNA167510

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38227_RAW.tar 129.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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