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Series GSE38463 Query DataSets for GSE38463
Status Public on Jan 14, 2013
Title Gene expression profiling of mouse B cell progenitors
Organism Mus musculus
Experiment type Expression profiling by array
Summary Gene expression profiling was performed of Pax5 wild type bone marrow subsets from common lymphoid progenitors through to Hardy stage F cells. These cells were obtained by flow sorting of bone marrow.
 
Overall design Gene expression profiling was performed on 41 samples of RNA extracted from flow sorted B cell precursor populations from common lymphoid progenitor (CLP) through to Hardy stage F.
Note that several of the genes expressed in normal mouse B cell progenitors are also involved by deletion/mutation in hypodiploid ALL.
Related hypodiploid ALL studies:
Gene expression data: GEO GSE27237
SNP & Sequencing data: dbGaP phs000341.v1.p1
 
Contributor(s) Chen S, Downing JR, Mullighan CG
Citation(s) 23334668
Submission date Jun 04, 2012
Last update date Feb 11, 2019
Contact name Shann-Ching Chen
E-mail(s) Shann-Ching.Chen@stjude.org
Organization name St. Jude Children's Research Hospital
Department Pathology
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (41)
GSM942342 Hardy Fraction CLP cell, rep 1
GSM942343 Hardy Fraction CLP cell, rep 2
GSM942344 Hardy Fraction CLP cell, rep 3
Relations
BioProject PRJNA168035

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38463_RAW.tar 151.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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