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Series GSE3849 Query DataSets for GSE3849
Status Public on Dec 16, 2006
Title Differential transcript abundance in NPAS2 mutant mouse at ZT14
Organism Mus musculus
Experiment type Expression profiling by array
Summary Investigation of RNA transcript abundance in aortic tissue of NPAS2 mutant versus wild type mice at ZT14
Keywords: Differential RNA abundance in genetic mutant
Overall design One-way ANOVA design with Strain (NPAS mutant/WT) as the independent variable and five replicates in each group
Contributor(s) Curtis AM, Cheng Y, Price TS, Reilly D, Kapoor S, FitzGerald GA
Citation(s) 17360665
Submission date Dec 16, 2005
Last update date Feb 11, 2019
Contact name Radu Daniel Rudic
Phone 215 898-0255
Fax 215 573-9004
Organization name University of Pennsylvania
Department Center of Experimental Therapeutics
Lab Garret FitzGerald Lab
Street address 421 Curie Boulevard
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (10)
GSM88142 Wild Type replicate F11
GSM88143 Wild Type replicate F14_2
GSM88144 Wild Type replicate F15
BioProject PRJNA94075

Differential expression for NPAS2 mutant versus wild type mouse: LIMMA analysis results header descriptions

Data table
ID_REF M t P.Value B
1449329_at -3.76E-01 -1.29E+01 1.36E-05 9.07790784
1422257_s_at 2.20E+00 7.81E+00 1.10E-02 4.98734172
1453144_at -2.37E+00 -7.54E+00 1.17E-02 4.68005807
1425645_s_at 2.11E+00 6.69E+00 4.15E-02 3.60451012
1433713_at -7.24E-01 -6.54E+00 4.29E-02 3.40321717
1415999_at -3.97E-01 -6.46E+00 4.29E-02 3.2907325
1436944_x_at -7.46E-01 -6.24E+00 5.31E-02 2.97665388
1452148_at -2.32E-01 -6.20E+00 5.31E-02 2.92648915
1446771_at 1.05E+00 6.00E+00 6.61E-02 2.64112378
1451787_at 2.02E+00 5.98E+00 6.61E-02 2.60148768
1452780_at -3.80E-01 -5.83E+00 8.02E-02 2.38677171
1446720_at -9.91E-01 -5.74E+00 8.62E-02 2.24165275
1456909_at -4.19E-01 -5.71E+00 8.62E-02 2.20724735
1426363_x_at -2.63E-01 -5.59E+00 1.03E-01 2.01590088
1435353_a_at -7.71E-01 -5.43E+00 1.34E-01 1.76472102
1453145_at -1.95E+00 -5.26E+00 1.77E-01 1.50342168
1429452_x_at -1.88E+00 -5.21E+00 1.86E-01 1.41607899
1416358_at -5.95E-01 -5.11E+00 2.14E-01 1.26291488
1417561_at 8.54E-01 4.98E+00 2.65E-01 1.05668374
1419678_at -5.01E-01 -4.93E+00 2.84E-01 0.96119459

Total number of rows: 45101

Table truncated, full table size 2292 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided

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