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Series GSE3850 Query DataSets for GSE3850
Status Public on Dec 16, 2006
Title Differential transcript abundance in BMAL-/- mouse at ZT14
Organism Mus musculus
Experiment type Expression profiling by array
Summary Investigation of RNA transcript abundance in aortic tissue of BMAL-/- versus BMAL+/+ control mice at ZT14
Keywords: Differential RNA abundance in genetic mutant
Overall design One-way ANOVA design with Strain (BMAL-/- versus BMAL+/+) as the independent variable. Control group has five biological replicates, BMAL-/- group has four biological replicates.
Contributor(s) Curtis AM, Cheng Y, Price TS, Reilly D, Kapoor S, FitzGerald GA
Citation(s) 17360665
Submission date Dec 16, 2005
Last update date Feb 11, 2019
Contact name Radu Daniel Rudic
Phone 215 898-0255
Fax 215 573-9004
Organization name University of Pennsylvania
Department Center of Experimental Therapeutics
Lab Garret FitzGerald Lab
Street address 421 Curie Boulevard
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (9)
GSM88152 BMAL+/+ replicate F01
GSM88153 BMAL+/+ replicate F10
GSM88154 BMAL+/+ replicate F04
BioProject PRJNA94077

Differential expression for BMAL-/- knockout versus BMAL+/+ control mouse: LIMMA analysis results header descriptions

Data table
ID_REF M t P.Value B
1421037_at 2.41E+00 4.16E+01 7.90E-06 8.863592173
1425099_a_at 1.71E+00 2.41E+01 2.79E-04 7.80296607
1416958_at -2.78E+00 -2.04E+01 6.59E-04 7.292054066
1422438_at -8.31E-01 -1.38E+01 8.26E-03 5.639154852
1424945_at -5.27E-01 -1.29E+01 8.26E-03 5.313585316
1458176_at -1.79E+00 -1.27E+01 8.26E-03 5.215863972
1444644_x_at 1.13E-01 1.26E+01 8.26E-03 5.190392939
1448276_at -1.17E+00 -1.26E+01 8.26E-03 5.175335749
1418174_at -2.01E+00 -1.25E+01 8.26E-03 5.116483447
1452972_at 2.29E-01 1.24E+01 8.26E-03 5.08715975
1451707_s_at 4.85E-01 1.23E+01 8.26E-03 5.022472544
1423858_a_at -1.07E+00 -1.22E+01 8.26E-03 5.010288671
1416125_at -1.30E+00 -1.21E+01 8.45E-03 4.936806999
1422905_s_at -8.85E-01 -1.19E+01 8.53E-03 4.875736835
1449335_at -8.66E-01 -1.13E+01 1.18E-02 4.585705564
1460510_a_at -4.61E-01 -1.11E+01 1.30E-02 4.458893466
1418697_at -1.67E+00 -1.06E+01 1.65E-02 4.228460163
1434551_at -2.08E-01 -1.04E+01 1.90E-02 4.076571882
1459522_s_at 4.83E-01 1.02E+01 1.96E-02 4.006699307
1416225_at -4.24E-01 -9.93E+00 2.28E-02 3.833552634

Total number of rows: 45101

Table truncated, full table size 2329 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided

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