NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE38646 Query DataSets for GSE38646
Status Public on Jun 14, 2012
Title DNA methylation alterations in response to pesticide exposure in vitro
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of DNA from K562 cells treated with three commonly used pesticides and control (EtOH). The Illumina Infinium 27k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 27,000 CpGs in DNA samples.
 
Overall design Bisulphite converted DNA from the samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip. 7 pesticides were used.
 
Contributor(s) Hou L, Zhang X
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 11, 2012
Last update date Jan 02, 2015
Contact name xiao zhang
Organization name Northwestern University
Street address 680 N. Lake Shore Drive
City Chicago
ZIP/Postal code 60605
Country USA
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (27)
GSM946788 Control 0
GSM946789 Control 1
GSM946790 Control 2
Relations
BioProject PRJNA168485

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38646_RAW.tar 5.8 Mb (http)(custom) TAR
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap