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Status |
Public on Jun 08, 2014 |
Title |
RRP1B is a Metastasis Modifier that Regulates the Transcriptome through mRNA Splicing |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
RRP1B is a Metastasis Modifier that Regulates the Transcriptome through mRNA Splicing
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Overall design |
To assess the role of RRP1B in alternative mRNA splicing, we knocked down the expression of Rrp1b in the highly metastatic mouse mammary tumor cell line Mvt-1 using shRNA. Two control and two knockdown stable cell lines were selected for RNA-sequencing.
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Contributor(s) |
Lee M, Crawford NP, Gildea D, Wolfsberg TG |
Citation(s) |
23604122 |
Submission date |
Jun 12, 2012 |
Last update date |
May 15, 2019 |
Contact name |
Nigel P.S. Crawford |
E-mail(s) |
crawforn@mail.nih.gov
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Organization name |
Human Genome Research Institute
|
Street address |
50 South Drive, Room 5154
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
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Platforms (1) |
GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
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Samples (4)
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Relations |
BioProject |
PRJNA168458 |
SRA |
SRP013709 |