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Series GSE38682 Query DataSets for GSE38682
Status Public on Nov 30, 2012
Title H3K4me3 Marks in Normal and Cancerous Prostate Cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary H3K4me3 ChIP-seq was done to examine transcription start sites in a genome wide manner, and compare results to CAGE-seq
 
Overall design One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.
 
Contributor(s) Statham A
Citation(s) 23245995
Submission date Jun 13, 2012
Last update date May 15, 2019
Contact name Aaron Statham
E-mail(s) a.statham@garvan.org.au
Organization name Garvan Institute of Medical Research
Department Cancer Department
Lab Epigenetics Research Laboratory
Street address 384 Victoria St
City Darlinghurst
State/province NSW
ZIP/Postal code 2010
Country Australia
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM947523 PrEC Cells H3K4me3 ChIP-seq
GSM947524 LNCaP Cells H3K4me3 ChIP-seq
This SubSeries is part of SuperSeries:
GSE38685 Normal and Cancerous Prostate Cells
Relations
BioProject PRJNA168463
SRA SRP013727

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38682_RAW.tar 901.1 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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