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Series GSE38804 Query DataSets for GSE38804
Status Public on Jun 19, 2015
Title Epigenome analysis of brain between human and chimpanzee
Platform organism Homo sapiens
Sample organisms Pan troglodytes; Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of brain and liver from human and chimpanzee. The Illumina HumanMethylation27 DNA Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs for each sample. Samples included liver and NeuN-positive/NeuN-negative/unsorted brain in three individuals from each of two species (human and chimpanzee).
 
Overall design Bisulphite converted DNA from the 24 samples were hybridised to the Illumina HumanMethylation27 Beadchip (HumanMethylation27_270596_v.1.2)
 
Contributor(s) Yutaka N, MIki B, Genta N, Hiroyuki A, Yasushi O, Tadanari K, Kazuya I
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 19, 2012
Last update date Jun 19, 2015
Contact name Junko Ueda
Organization name RIKEN
Department BSI
Lab Laboratory for Molecular Dynamics of Mental Disorders
Street address Hirosawa 2-1
City Wako-shi
State/province Saitama-ken
ZIP/Postal code 351-0106
Country Japan
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (24)
GSM949757 H1 NeuN positive
GSM949758 H2 NeuN positive
GSM949759 H3 NeuN positive
Relations
BioProject PRJNA168980

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38804_RAW.tar 5.8 Mb (http)(custom) TAR
GSE38804_signal_intensities.txt.gz 3.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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