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Series GSE39180 Query DataSets for GSE39180
Status Public on Aug 29, 2018
Title Genes regulated/modulated by jagged1 in endothelial cells during inflammation
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Proinflammatory activation of endothelial cells leads to recruitment of leukocytes by upregulation of adhesion molecules and presentation of chemoattractants. In response to such activation there is also a strong shift in the endothelial expression of Notch ligands, with downregulation of Dll4 and a upregulation of JAG1. To assess whether Jagged1 would affect the endothelial activation profile, we suppressed JAG1 expression during IL-1β-induced activation by means of siRNA and performed a genome-wide transcriptome analysis. Our results show for the first time that Jagged1 modulates the transcription profile of activated endothelial cells and describe data that imply a role for Jagged1 in sharpening the inflammatory profile of the vasculature, giving it an edge towards leukocyte recruitment. These findings imply that Jagged1 might be a potential therapeutic target to attenuate inflammation and reduce tissue damage in inflammatory diseases.
 
Overall design Genome-wide analysis of total RNA obtained from confluent human umbilival vein endothelial cells (pool of 7 individual donors) transfected with JAG1 siRNA or scrambled siRNA, and further subjected to proinflammatory activation by IL-1β 24 hours, compared to unstimulated controls (3 biological replicates in each group) (see below for the four resulting sample groups) .
 
Contributor(s) Edelmann RJ, Sundlisæter E, Haraldsen G
Citation(s) 29449332
Submission date Jul 09, 2012
Last update date Aug 29, 2018
Contact name Guttorm Haraldsen
E-mail(s) guttorm.haraldsen@rr-research.no
Organization name Oslo University Hospital
Department Department for Pathology
Lab LIIPAT
Street address Sognsvannsveien 20
City OSLO
State/province OSLO
ZIP/Postal code 0027
Country Norway
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM957616 HUVEC scrambled siRNA + IL-1β 24 hours rep1
GSM957617 HUVEC scrambled siRNA unstimulated rep1
GSM957618 HUVEC JAG1 siRNA + IL-1β 24 hours rep1
This SubSeries is part of SuperSeries:
GSE85987 Inhibition of endothelial Notch signaling attenuates inflammation
Relations
BioProject PRJNA170167

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39180_RAW.tar 26.2 Mb (http)(custom) TAR
GSE39180_non-normalized.txt.gz 3.5 Mb (ftp)(http) TXT
GSE39180_readme.txt.gz 107 b (ftp)(http) TXT
Processed data included within Sample table

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