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Series GSE39387 Query DataSets for GSE39387
Status Public on Jul 17, 2012
Title Discordant cellular response to pre-surgical letrozole in bilateral synchronous ER+ breast cancers with a KRAS mutation or FGFR1 gene amplification
Organism Homo sapiens
Experiment type Expression profiling by array
Summary This clinical case resulted from an ongoing trial at Vanderbilt University and abroad where ER+ breast cancer patients are administered 2-3 weeks of aromatase inhibitor therapy leading up to definitive surgical resection of the tumor. In this case, we describe a study patient presenting with bilateral primary ER+ breast tumors. Short term hormonal therapy substantially reduced proliferation in one tumor, while the second was essentially unchanged. Extensive molecular and genetic workup of the two tumors yielded divergent lesions in the two tumors; an activating KRAS mutation in the responsive tumor, and an amplification of the FGFR1 locus in the treatment-refractory tumor.
 
Overall design Surgical tumor specimens from ER+ breast cancer patient 7603 who was administered letrozole for 16 days leading up to definitive surgery were utilized for RNA extraction and hybridization to Affymetrix Gene expression microarrays.
 
Contributor(s) Balko JM, Arteaga CL
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Submission date Jul 16, 2012
Last update date Apr 20, 2018
Contact name Justin M Balko
Organization name Vanderbilt University
Department Medicine
Lab Arteaga
Street address 777 Preston Research Building
City Nashville
State/province TN
ZIP/Postal code 37232-6307
Country USA
 
Platforms (1)
GPL13158 [HT_HG-U133_Plus_PM] Affymetrix HT HG-U133+ PM Array Plate
Samples (2)
GSM967265 7603, right breast tumor
GSM967266 7603, left breast tumor
Relations
BioProject PRJNA170759

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39387_RAW.tar 4.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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