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Series GSE39550 Query DataSets for GSE39550
Status Public on Jul 01, 2014
Title Transcriptome analysis of Yap mutant kidneys
Organism Mus musculus
Experiment type Expression profiling by array
Summary Microarrays were used to examine gene expression changes between control and mutant (YapCM-/-) kidneys to investigate molecular changes responsible for abnormal nephrogenesis seen in Yap mutants. This work identifies a list of potential genes regulated by Yap during nephron development.
 
Overall design Total RNA obtained from three mutants and three controls kidneys at embryonic day E13.5 were used for the expression profiling analysis.
 
Contributor(s) Reginensi A, McNeil H, Virtanen C
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Submission date Jul 21, 2012
Last update date Jan 16, 2019
Contact name carl virtanen
E-mail(s) cvirtane@uhnresearch.ca
Organization name University Health Network
Department Princess Margaret Genomics Centre
Street address 101 College St
City Toronto
State/province Ontario
ZIP/Postal code M5G 1L7
Country Canada
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (6)
GSM971586 Kidneys from control (1)
GSM971587 Kidneys from control (2)
GSM971588 Kidneys from control (3)
Relations
BioProject PRJNA171111

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39550_RAW.tar 15.8 Mb (http)(custom) TAR
GSE39550_matrix_non-normalized.txt.gz 1.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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