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Series GSE39661 Query DataSets for GSE39661
Status Public on Sep 18, 2012
Title Identification of the hemogenic endothelial progenitor and its direct precursor in human pluripotent stem cell differentiation cultures
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Hemogenic endothelium (HE) is the source of HSCs in the developing embryo. In this study we have identified the hemogenic endothelial progenitors and their precursors originating from differentiated H1 cells on OP9 stromal cells.
 
Overall design RNA-seq of hemogenic endothelial progenitors and their precursors originating from differentiated H1 cells on OP9 stromal cells.
 
Contributor(s) Choi K, Vodyanik M, Togarrati PP, Suknuntha K, Kumar A, Samarjeet F, Probasco MD, Tian S, Stewart R, Thomson JA, Slukvin II
Citation(s) 22981233
Submission date Jul 26, 2012
Last update date May 15, 2019
Contact name Igor Slukvin
E-mail(s) islukvin@wisc.edu
Phone 608-263-0058
Organization name University of Wisconsin
Department Department of Pathology and Laboratory Medicine
Street address 1220 Capitol Court
City Madison
State/province WI
ZIP/Postal code 53706
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (17)
GSM976973 Day 4 differentiated H1 (human embryonic stem cell) derived EMHlin-KDRbrightAPLNR+PDGFRalow/- cells [duplicate_1of2]
GSM976974 Day 4 differentiated H1 derived KDRdim cells
GSM976975 Day 5 differentiated H1 derived VE-cadherin+CD73-CD43+CD235a+CD41a+ cells
Relations
BioProject PRJNA171560
SRA SRP014620

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39661_my_110208_100716_100803_100508_H1_counts.txt.gz 806.1 Kb (ftp)(http) TXT
GSE39661_my_110208_100716_100803_100508_H1_tpm.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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