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Series GSE39860 Query DataSets for GSE39860
Status Public on Aug 31, 2012
Title Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Contributor(s) Koike N, Yoo S, Huang H, Kumar V, Lee C, Kim T, Takahashi JS
Citation(s) 22936566
Submission date Aug 03, 2012
Last update date May 15, 2019
Contact name Joseph S Takahashi
E-mail(s) joseph.takahashi@utsouthwestern.edu
Phone 214-648-1876
Organization name University of Texas Southwestern Medical Center
Department HHMI, Neuroscience
Lab Joseph S. Takahashi
Street address 5323 Harry Hines Blvd., NA4.118
City Dallas
State/province TX
ZIP/Postal code 75390-9111
Country USA
 
Platforms (2)
GPL14602 AB SOLiD 4 System (Mus musculus)
GPL15907 AB 5500xl Genetic Analyzer (Mus musculus)
Samples (150)
GSM982688 Sample 1_BMAL1 ChIP-seq
GSM982689 Sample 2_BMAL1 ChIP-seq
GSM982690 Sample 3_BMAL1 ChIP-seq
This SuperSeries is composed of the following SubSeries:
GSE39977 Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals [ChIP-seq]
GSE39978 Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals [RNA-seq]
Relations
BioProject PRJNA172195

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39860_RAW.tar 57.5 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp

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