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Series GSE39909 Query DataSets for GSE39909
Status Public on Aug 30, 2012
Title Bromodomain-dependent stage-specific male genome programming by Brdt [Illumina BeadArray]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Male germ cell differentiation is a highly regulated multistep process initiated by the commitment of progenitor cells into meiosis and characterized by major chromatin reorganizations in haploid spermatids. We report here that a single member of the double bromodomain BET factors, Brdt, is a master regulator of both meiotic divisions and post-meiotic genome repackaging. Upon its activation at the onset of meiosis, Brdt drives and determines the developmental timing of a testis-specific gene expression program. In meiotic cells, Brdt initiates a genuine histone acetylation-guided programming of the genome by activating essential meiotic genes and repressing a “progenitor cells” gene expression program, while “priming” a post-meiotic gene group for further activation. At post-meiotic stages, a global chromatin hyperacetylation gives the signal for Brdt’s first bromodomain to direct the genome-wide replacement of histones by transition proteins. Brdt is therefore a unique and essential regulator of male germ cell differentiation, which, by using various domains in a developmentally controlled manner, first drives a specific spermatogenic gene expression program, and later controls the tight packaging of the male genome.
 
Overall design Total RNA obtained from testes from prepuberal mice at 17dpp and at 20dpp were compared between Brdt-/- and Brdt+/- (17dpp), between Brdt-/- and Brdt +/+ (20dpp) and between BrdtBD1del and Brdt wt mice (20dpp). In each experiments, 6 replicates of each genotype and condition were used.
 
Contributor(s) Rousseaux S, Khochbin S, Gaucher J, Guardiola P
Citation(s) 22922464
Submission date Aug 06, 2012
Last update date Jan 16, 2019
Contact name Sophie Rousseaux
Organization name INSERM-UGA
Department IAB
Lab U1209
Street address Bd de la Chantourne
City La Tronche
ZIP/Postal code 38706
Country France
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (36)
GSM981144 72
GSM981145 73
GSM981146 122A
This SubSeries is part of SuperSeries:
GSE39910 Bromodomain-dependent stage-specific male genome programming by Brdt
Relations
BioProject PRJNA172755

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39909_RAW.tar 15.8 Mb (http)(custom) TAR
GSE39909_non-normalized.txt.gz 9.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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