NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE40027 Query DataSets for GSE40027
Status Public on Jan 01, 2022
Title GM-CSF cultured and LPS stimulated WT and miR-155 KO DC
Organism Mus musculus
Experiment type Expression profiling by array
Summary Analyze the transcriptome pattern of miR-155 deficient BMDC in both steady-state and inflammatory conditions, in comparison to WT counterparts.
 
Overall design Total bone marrow was cultured in 40 ng/mL GM-CSF enriched RPMI-media for 7 days. A fraction of the floating cells were stimulated with 100 ng/mL LPS for 16 h, after with both unstimulated and stimulate DC were sorted by FACS for DC markers and activation markers (CD86). Unactivated DC from unstimulated samples (CD86-) were isolated together with activated (adherent) DC from LPS stimulated samples (CD86+), and total RNA was isolated.
 
Contributor(s) Hedlund S, Yuzawa Y, Fukao T
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 10, 2012
Last update date Jan 01, 2022
Contact name Yoko Fukuda Yuzawa
Organization name Max-Planck Institute of Immunobiology
Street address Stübeweg 51
City Freiburg
ZIP/Postal code 79108
Country Germany
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (8)
GSM983895 WT_s_rep2
GSM983896 WT_u_rep1
GSM983897 WT_u_rep2
Relations
BioProject PRJNA172416

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40027_RAW.tar 73.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap