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Series GSE40165 Query DataSets for GSE40165
Status Public on Dec 31, 2012
Title Immune correlates of early prednisolone therapy in children and adolescents with dengue
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Dengue is the most important arboviral infection of humans. A host pro-inflammatory immune response is widely believed to contribute to the clinical complications that occur in some patients with dengue. Here, immune correlates of early prednisolone therapy were defined in Vietnamese dengue patients enrolled in a randomized controlled trial, comparing a three day regimen of high (2mg/kg) or low (0.5mg/kg) dose prednisolone with placebo. Prednisolone conferred a small change in the whole blood gene expression profile, with 81 transcripts from 64 genes differentially abundant between high-dose prednisolone and placebo treated patients. A prominent theme in the prednisolone gene expression signature was the under-abundance of transcripts from genes associated with T and NK cell cytolytic effector functions. Surprisingly, prednisolone therapy was not associated with attenuation of early-convalescent T cell responses or plasma cytokine levels. Collectively, these findings are consistent with a remarkably benign influence of prednisolone on immune response parameters in dengue patients, and are in line with the trial evidence showing lack of impact on clinical laboratory endpoints and clinical phenotype.
 
Overall design The gene expression microarray assay was conducted on samples from the first 123 consecutive patients (placebo, 40; 0.5mg/kg prednisolone, 42; 2.0mg/kg prednisolone, 41).
 
Contributor(s) Tien NH, Wills B, Simmons C
Citation(s) 24349598
Submission date Aug 16, 2012
Last update date Aug 13, 2018
Contact name Nguyen Hanh Tien
E-mail(s) tiennth@oucru.org
Organization name Oxford University Clinical Research Unit
Department Dengue group
Street address 764 Vo Van Kiet
City Ho Chi Minh
ZIP/Postal code 70000
Country Viet Nam
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (358)
GSM986579 A191-PRE-High dose
GSM986580 A191-POST-High dose
GSM986581 A192-PRE-Low dose
Relations
BioProject PRJNA172981

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40165_RAW.tar 26.2 Mb (http)(custom) TAR
GSE40165_non_normalized.txt.gz 63.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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