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Series GSE40387 Query DataSets for GSE40387
Status Public on Oct 01, 2012
Title Liposome transfection of miR-145 induces immune response via RIG-I in mesenchymal stem cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Liposomal transfection reagents are frequenly used in gene deliverytransfer experiments. The validity of these experiments depends on the absence of changes in genes other than the target gene. Here we report that transfection of synthetic microRNA-145 using liposomes, but not electroporation, induced the upregulation of a range of immune-related genes in human mesenchymal stem cells. The immune response was dependent on the binding of microRNA-145 to retinoic acid inducible gene-I, and was independent on endosome functionality and toll-like receptors. Immune response was not observed after transfection of any of nine other small RNAs, suggesting a sequence restricted response. One of the upregulated mRNAs encode interferon β, which presumably in turn induced the upregulation of another group of immune associated genes. Interestingly, exposure of liposomes alone led to the upregulation of some immune genes, one of them retinoic acid inducible gene-I mRNA.
 
Overall design Comparison of immune gene expression patterns in BM-MSC donors after transfection of synthetic miR-145.
 
Contributor(s) Karlsen TA, Brinchmann JE
Citation(s) 23568258
Submission date Aug 27, 2012
Last update date Aug 13, 2018
Contact name Tommy Aleksander Karlsen
E-mail(s) tommy.a.karlsen@rr-research.no
Organization name Oslo University Hospital, Rikshospitalet
Department Norwegian center for stem cell research
Street address Sognsvannsveien
City Oslo
ZIP/Postal code 0317
Country Norway
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM992659 Sample A4
GSM992660 Sample B4
GSM992661 Sample C4
Relations
BioProject PRJNA173823

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40387_RAW.tar 26.2 Mb (http)(custom) TAR
GSE40387_non-normalized.txt.gz 3.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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