|
| Status |
Public on Apr 15, 2013 |
| Title |
Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation (ChIP-Seq) |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Analysis of chromatin state during differentiation of alveolar epithelial type 2 (AT2) cells into AT1 cells. Timepoints taken at Day 0 (AT2 cell), and Day 8 in culture (AT1-like cells).
|
| |
|
| Overall design |
Examination of 2 different histone modifications in 2 cell types.
|
| |
|
| Contributor(s) |
Marconett CN, Zhou B, Rieger M, Selamat SA, Dubourd M, Lynch SK, Siegmund KD, Berman BP, Borok Z, Laird-Offringa IA |
| Citation(s) |
23818859, 25343132 |
| Submission date |
Aug 27, 2012 |
| Last update date |
Jul 17, 2023 |
| Contact name |
Crystal N Marconett |
| E-mail(s) |
cmarcone@usc.edu, cmarconett@coh.org
|
| Phone |
626-218-4357
|
| Organization name |
City of Hope
|
| Department |
Integrative Translational Sciences
|
| Lab |
Crystal Marconett
|
| Street address |
1500 E Duarte Rd
|
| City |
Duarte |
| State/province |
CA |
| ZIP/Postal code |
91010 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (6)
|
|
| This SubSeries is part of SuperSeries: |
| GSE38571 |
Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation |
|
| Relations |
| BioProject |
PRJNA173869 |
| SRA |
SRP015134 |
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