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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jan 13, 2006 |
Title |
sikes-affy-mouse-84486 |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array
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Summary |
Reversible phosphorylation is a critical step in the control of cellular signaling events. The protein phosphatase 1 (PP1) regulates neuronal proteins by mediating their de-phosphorylation. PP1 selectivity and subcellular localization is conferred via association with a panel of interacting proteins. We have extensively characterized the association of PP1 with inhibitor-1, an interacting protein widely expressed in brain and heart. Inhibitor-1 deletion results in a persistently active PP1 phosphatase in vitro. Inhibitor-1 overexpression results in increased transformation of cultured cells and enhances the rate of learning and memory in mouse models through largely unknown mechanisms. Significantly, inhibitor-1 activation is cAMP-sensitive. The genes regulated by inhibitor-1/PP1 signals have not been characterized. Identification of these genes is expected to provide key insights into the role of inhibitor-1/PP1 escape from cellular homeostasis and regulation of neuronal learning and memory. We will determine gene expression patterns in hippocampus of wild-type and inhibitor-1 knock-out mice. The results of these studies of constitutive expression will be used as a baseline for future studies aimed to determine the role cAMP-mediated gene expression in I-1 knock-out mice. We hypothesize that the genes regulated by the inhibitor-1/PP1 holoenzyme are critical to cellular growth commitment including resistance to growth arrest and neuronal learning and memory We will examine the role of inhibitor-1 in regulating hippocampal gene expression using total RNA isolated from whole hippocampi of inhibitor-1 knockout (I-1-/-) animals and parental C57Bl6 controls under non-stimulated conditions. Animals will be sacrificed by a standard protocol. Hippocampal tissue will be rapidly dissected from several animals, flash frozen within 1 minute of extraction, pooled, and total RNA will be processed immediately using TriZol. Keywords: dose response
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Contributor(s) |
Sikes SS |
Citation missing |
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Submission date |
Jan 13, 2006 |
Last update date |
Feb 11, 2019 |
Contact name |
Winnie Liang |
E-mail(s) |
wliang@tgen.org
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Organization name |
Translational Genomics
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Street address |
445 N. Fifth Street
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City |
Phoenix |
State/province |
AZ |
ZIP/Postal code |
85012 |
Country |
USA |
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Platforms (1) |
GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
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Samples (6)
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GSM92512 |
brain, hippocampus: wildtype 1_e1_le1 |
GSM92513 |
brain, hippocampus: wildtype 2_e1_le1 |
GSM92514 |
brain, hippocampus: wildtype 3_e1_le1 |
GSM92515 |
brain, hippocampus: inhibitor-1 KO 1_e1_le1 |
GSM92516 |
brain, hippocampus: inhibitor-1 KO 2_e1_le1 |
GSM92517 |
brain, hippocampus: inhibitor-1 KO 3_e1_le1 |
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Relations |
BioProject |
PRJNA95171 |
Supplementary file |
Size |
Download |
File type/resource |
GSE4040_RAW.tar |
20.8 Mb |
(http)(custom) |
TAR (of CEL) |
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