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Series GSE40406 Query DataSets for GSE40406
Status Public on Dec 02, 2013
Title Transcriptome wide target profiling for miR-199a-5p and miR-424-3p.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Whole transcriptome Identification of direct targets of miR-199a-5p and miR-424-3p using biotinylated pull-downs found that both miRNAs are likely to have a role in the cell cycle.
 
Overall design HEK293T cells were transfected with biotinylated miRNAs (either miR-199a-5p or miR-424-3p). The miRNAs and target mRNA were pulled down with streptavidin and compared to the input control.
 
Contributor(s) Cloonan N
Citation(s) 24629056
Submission date Aug 27, 2012
Last update date Aug 13, 2018
Contact name Nicole Cloonan
E-mail(s) nicole.cloonan@qimrberghofer.edu.au
Organization name QIMR Berghofer Medical Research Institute
Lab Genomic Biology
Street address 300 Herston Road
City Herston
State/province Queensland
ZIP/Postal code 4006
Country Australia
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM993240 miR-424-3p rep 1
GSM993243 miR-424-3p rep 2
GSM993244 miR-424-3p rep 3
Relations
BioProject PRJNA173889

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40406_RAW.tar 26.2 Mb (http)(custom) TAR
GSE40406_non-normalized.txt.gz 3.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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