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Series GSE40409 Query DataSets for GSE40409
Status Public on Dec 31, 2014
Title Transcriptome wide target profiling for miR-3118-3p and miR-4307-3p.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Whole transcriptome Identification of direct targets of miR-3118-3p and miR-4307-3p using biotinylated pull-downs found that both miRNAs have roles relevant to pancreatic cancer.
 
Overall design HEK293T cells were transfected with biotinylated miRNAs (either miR-3118-3p or miR-4307-3p). The miRNAs and target mRNA were pulled down with streptavidin and compared to the input control.
 
Contributor(s) Cloonan N
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 27, 2012
Last update date Aug 13, 2018
Contact name Nicole Cloonan
E-mail(s) nicole.cloonan@qimrberghofer.edu.au
Organization name QIMR Berghofer Medical Research Institute
Lab Genomic Biology
Street address 300 Herston Road
City Herston
State/province Queensland
ZIP/Postal code 4006
Country Australia
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM993359 miR-3118-3p rep 1
GSM993360 miR-3118-3p input rep 1
GSM993361 miR-4307-3p rep 1
Relations
BioProject PRJNA173891

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40409_RAW.tar 26.2 Mb (http)(custom) TAR
GSE40409_non-normalized.txt.gz 3.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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