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Series GSE40416 Query DataSets for GSE40416
Status Public on Dec 31, 2012
Title Acute and long-term effects of mutant p53 in vivo [MEF]
Organism Mus musculus
Experiment type Expression profiling by array
Summary The specific roles of mutant p53’s dominant-negative (DN) or gain-of-function (GOF) properties in regulating acute response and long-term tumorigenesis is unclear. Using “knock-in” mouse strains expressing varying R246S mutant levels, we show that DN effect on transactivation is universally observed after acute p53 activation whereas the effect on cellular outcome is cell-type specific. Reducing mutant p53 levels abrogated the DN effect. Mutant p53’s DN effect protected against radiation-induced death, but did not accentuate tumorigenesis. Furthermore, the R246S mutant did not promote tumorigenesis compared to p53-/- mice in various models, even in the absence of MDM2, unlike the R172H mutant. Together, these data demonstrate that mutant p53’s DN property only affects acute responses, whereas GOF is not universal, being mutation-type specific.
 
Overall design Transcriptomes of mouse embryonic fibroblasts harvested from embyros of different p53 genotypes were profiled. A total of 6 primary clones of MEFs were used and these cells were transformed with E1A/Ras. Data was analysed by mixed model ANOVA using Partek.
 
Contributor(s) Lee MK, Teoh WW
Citation(s) 23238012
Submission date Aug 28, 2012
Last update date Mar 06, 2018
Contact name Kanaga Sabapathy
Organization name National Cancer Centre Singapore
Street address 11 Hospital Drive
City Singapore
State/province Singapore
ZIP/Postal code 169610
Country Singapore
 
Platforms (1)
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
Samples (12)
GSM993437 MEF_p53(-/-)_primary_rep1
GSM993438 MEF_p53(-/-)_primary_rep2
GSM993439 MEF_p53(-/-)_primary_rep3
This SubSeries is part of SuperSeries:
GSE40417 Acute and long-term effects of mutant p53 in vivo
Relations
BioProject PRJNA173910

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40416_RAW.tar 292.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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