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Series GSE40457 Query DataSets for GSE40457
Status Public on Jun 01, 2013
Title Transgenerational profiling of small non-coding RNAs in C.elegans RSD mutants
Organism Caenorhabditis elegans
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Attempt to identify progressive changes in small non-coding RNA levels in C.elegans lacking RSD-2 or RSD-6.
 
Overall design Small non-coding RNA (18-30nt) was extracted from animals the indicated number of generations after homozygosity was established
 
Contributor(s) Sarkies P, Simon M, Ahmed S, Miska E
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 29, 2012
Last update date May 15, 2019
Contact name Eric A. Miska
E-mail(s) e.miska@gurdon.cam.ac.uk
Phone 44-1223-767221
Organization name University of Cambridge
Department Wellcome Trust/Cancer Research UK Gurdon Institute, The Henry We
Lab Miska
Street address Tennis Court Rd
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
 
Platforms (1)
GPL13657 Illumina HiSeq 2000 (Caenorhabditis elegans)
Samples (9)
GSM994469 RSD-2 F0
GSM994470 RSD-2 F2
GSM994471 RSD-2 F10
This SubSeries is part of SuperSeries:
GSE40460 RSD-2 and RSD-6 promote germ cell immortality by repressing spermatogenesis and repeat loci via small interfering RNAs
Relations
BioProject PRJNA174089
SRA SRP015315

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40457_RAW.tar 187.7 Mb (http)(custom) TAR (of FA)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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