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Series GSE40473 Query DataSets for GSE40473
Status Public on Dec 01, 2020
Title Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 2)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome-wide distribution of EZH2, H3K27me3 and H3K36me1 determined by ChIP-seq in SUDHL6 cells in the absence or presence of iEZH
 
Overall design Histone marks (H3K27me3, H3K36me1) and EZH2 binding by ChIP-seq in SUDHL6 DLBCL cell line after 96 hours of treatment with iEZH (1.5 uM).
 
Contributor(s) Trojer P, Garapaty S, Lan F, Hatton C, Bryant B
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 29, 2012
Last update date Dec 01, 2020
Contact name Barbara M Bryant
E-mail(s) barbara.bryant@constellationpharma.com
Organization name Constellation Pharmaceuticals
Street address 215 First Street
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (8)
GSM994745 SUDHL6 DMSO H3K27me3
GSM994746 SUDHL6 iEZH H3K27me3
GSM994747 SUDHL6 DMSO Input
This SubSeries is part of SuperSeries:
GSE40476 Selective lymphoma cell killing by a PRC2 small molecule inhibitor
Relations
BioProject PRJNA174127
SRA SRP015322

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40473_RAW.tar 9.0 Gb (http)(custom) TAR (of BED, TDF, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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