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Series GSE40798 Query DataSets for GSE40798
Status Public on Jan 01, 2014
Title Epigenetic analysis of men with low birth weight following a control and high-fat overfeeding diet
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome-wide DNA methylation profiling of young men born with low birth weight following a control and high-fat overfeeding diet using Illumina's Infinium 27k Human DNA methylation Beadchip v. 1.2. DNA methylation profiles were obtained for 27,578 CpG sites in human skeletal muscle.
 
Overall design Randomized cross-over desgin, where all subjects receieved both treatments (control and high-fat overfeeding diet). Biopsies were obtained from 17 different individuals amounting to 16 samples following the control diet and 15 samples following the high-fat overfeeding diet (paired n=14). Bisulphite converted DNA from the 31 samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip.
 
Contributor(s) Jacobsen S, Vaag A, Fraga M
Citation(s) 24570141
Submission date Sep 12, 2012
Last update date Feb 20, 2019
Contact name Stine Jacobsen
E-mail(s) annesille@hotmail.com
Organization name Rigshospitalet
Department Diabetes and Metabolism
Street address Tagensvej 20, sec. 7652
City Copenhagen N
ZIP/Postal code 2200
Country Denmark
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (31)
GSM1001890 DNA_muscle_low_birth_weight_control_1
GSM1001891 DNA_muscle_low_birth_weight_control_2
GSM1001892 DNA_muscle_low_birth_weight_control_3
Relations
BioProject PRJNA175002

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40798_RAW.tar 5.8 Mb (http)(custom) TAR
GSE40798_non_normalized.txt.gz 4.4 Mb (ftp)(http) TXT
Processed data included within Sample table
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