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Series GSE40840 Query DataSets for GSE40840
Status Public on Sep 13, 2012
Title SM015 - Infection with SARS MA15 of C57BL/6J mice and Tnfrsf1a/1b knockouts
Organism Mus musculus
Experiment type Expression profiling by array
Summary Comparing the host response of C57BL/6J mice to Tnfrsf1a/1b knockouts in the same strain of mice.
 
Overall design Groups of 10-week-old C57BL/6 mice or Tnfrsf1a/1b knockout mice were infected with SARS MA15 at a dose of 10^5 PFU or mock infected. Mice were euthanized on days 4 and 7 post-infection to measure virus load and isolate samples for measurement of virus load, lung pathology, transcriptional analysis and proteomics analysis. Mock-infected animals were also harvested at each time point. Mice were weighed every 24 hours to measure general disease progression and any mouse approaching 30% weight loss was euthanized.
 
Contributor(s) Baric R, Katze M, Gralinski L, Law L, Chang J
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Submission date Sep 12, 2012
Last update date Jan 12, 2017
Contact name Michael Katze
E-mail(s) data@viromics.washington.edu
Organization name University of Washington
Department Microbiology
Lab Michael G. Katze, Ph.D
Street address Rosen Building 960 Republican St.
City Seattle
State/province WA
ZIP/Postal code 98109-4325
Country USA
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (20)
GSM1003079 SM015_1.1_B6_MA15_d4_1
GSM1003080 SM015_1.2_B6_MA15_d4_2
GSM1003081 SM015_1.3_B6_MA15_d7_1
Relations
BioProject PRJNA175064

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40840_RAW.tar 174.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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