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Series GSE40853 Query DataSets for GSE40853
Status Public on Jul 15, 2013
Title Meta-analysis of IDH-mutant cancers identifies EBF1 as an interaction partner for TET2
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Illumina Infinium 450k Human DNA Methylation BeadChip was used to obtain DNA methylation profiles across approximately 450,000 CpGs in 51 central chondrosarcoma.
 
Overall design Bisulphite converted DNA from each sample was hybridised to the Illumina Infinium 450k Human Methylation BeadChip.
 
Contributor(s) Guilhamon P
Citation(s) 23863747
Submission date Sep 13, 2012
Last update date Mar 22, 2019
Contact name Paul Guilhamon
Organization name SickKids
Street address 686 Bay Street
City Toronto
State/province ON
ZIP/Postal code M5G0A4
Country Canada
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (51)
GSM1003289 genomic DNA from central chondrosarcoma_Sample1
GSM1003290 genomic DNA from central chondrosarcoma_Sample2
GSM1003291 genomic DNA from central chondrosarcoma_Sample3
Relations
BioProject PRJNA175115

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40853_RAW.tar 183.1 Mb (http)(custom) TAR
GSE40853_non_normalized.txt.gz 122.9 Mb (ftp)(http) TXT
Processed data included within Sample table
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