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Series GSE41111 Query DataSets for GSE41111
Status Public on Sep 25, 2012
Title Transcriptional state during endodermal differentiation
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq was performed to determine the transcriptional activity of genes during endodermal differentiation
 
Overall design RNA pol II occupancy and histone marks of elongation and gene repression were analyzed during early endodermal differentiation
 
Contributor(s) Mullen AC, Young RA
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Submission date Sep 24, 2012
Last update date May 15, 2019
Contact name Richard A Young
E-mail(s) young_computation@wi.mit.edu
Phone 617-258-5219
Organization name Whitehead Institute for Biomedical Research
Lab Young Lab
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (3)
GSM1008647 48hr_H3K27me3_ChipSeq
GSM1008648 48hr_H3K79me2_ChipSeq
GSM1008649 48hr_Pol2_ChipSeq
Relations
BioProject PRJNA175831
SRA SRP015873

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41111_RAW.tar 3.3 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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