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Series GSE41160 Query DataSets for GSE41160
Status Public on Apr 01, 2013
Title Impact of delay to cryopreservation on RNA integrity and genome-wide expression profiles in resected tumor samples.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Using Illumina HumanHT-12 v3 Expression BeadChips, providing a genome-wide coverage of over 24,000 genes, we have analysed gene expression variation in samples of 3 hepatocellular carcinomas (HCC) and 3 lung carcinomas (LC) cryopreserved at times up to 2 hours after resection.
 
Overall design Total RNA obtained 3 frozen Hepatocellular Carcinomas and 3 Lung Carcinomas cryopreserved at 5 min, 15min, 30min and 120min after resection. Tissue samples from the center and the peripheral of the tumours were frozen for each time point.
 
Contributor(s) Caboux E, Le Calvez-Kelm F
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Submission date Sep 26, 2012
Last update date Aug 16, 2018
Contact name FLORENCE LE CALVEZ-KELM
E-mail(s) lecalvez@iarc.fr
Phone +33 4 72 73 83 58
Organization name International Agency for Research on Cancer
Department Genetics
Lab Genetic Cancer Susceptibility
Street address 150 Cours Albert Thomas
City LYON
ZIP/Postal code 69008
Country France
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (48)
GSM1009541 Hepatocellular carcinoma patient4 5min central
GSM1009542 Hepatocellular carcinoma patient4 5min peripheral
GSM1009543 Hepatocellular carcinoma patient4 15min central
Relations
BioProject PRJNA176396

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41160_RAW.tar 6.2 Mb (http)(custom) TAR
GSE41160_non-normalized.txt.gz 8.9 Mb (ftp)(http) TXT
Processed data included within Sample table
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