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Series GSE41233 Query DataSets for GSE41233
Status Public on Dec 31, 2012
Title Using Blood-Informative Transcripts in Geographical Genomics: Impact of Lifestyle on Gene Expression in Fijians
Organism Homo sapiens
Experiment type Expression profiling by array
Summary This study explores the impact of lifestyle and environment on gene expression through whole transcriptome profiling of peripheral blood samples in Fijian population (native Melanesians and Indians) living in the rural and urban areas.
 
Overall design 41 individuals (14 urban Melanesians, 10 rural Melanesians and 17 urban Indians) of both gender were sampled under informed consents. Only healthy individuals aged between 18 and 65 were sampled. RNA from each sample was hybridized to an Illumina array. No replicates were done in this study
 
Contributor(s) Gibson G, Nath A, Arafat D
Citation(s) 23162571
Submission date Sep 30, 2012
Last update date Aug 16, 2018
Contact name artika Praveeta Nath
E-mail(s) anath6@gatech.edu, natar210@gmail.com
Phone 6782376023
Organization name Georgia Institute of Technology
Department Biology
Lab Gibson
Street address Boggs Building, 770 State Street Georgia Institute of Technology
City Atlanta
State/province Georgia
ZIP/Postal code 30322
Country USA
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (41)
GSM1011521 Urban Fijian_FJ130189_9700
GSM1011522 Rural Fijian_FJ130196_7404
GSM1011523 Rural Fijian_FJ130208_4056
Relations
BioProject PRJNA176273

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41233_RAW.tar 6.2 Mb (http)(custom) TAR
GSE41233_non-normalized_data.txt.gz 7.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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