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Series GSE41799 Query DataSets for GSE41799
Status Public on Jun 01, 2014
Title Transcriptional profiling of human cancer cell lines upon ZMPSTE24 silencing
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Defining the aging-cancer relationship is a challenging task. Mice deficient in Zmpste24, a metalloproteinase mutated in human progeria and involved in nuclear prelamin A maturation, recapitulate many features of aging. However, their short lifespan and cell-intrinsic and -extrinsic alterations restrict the application and interpretation of carcinogenesis protocols. To circumvent these limitations we have generated Zmpste24 mosaic mice. Interestingly, these mice develop normally - revealing cell-extrinsic mechanisms are preeminent in progeria- and display decreased incidence of infiltrating oral carcinomas. Moreover, ZMPSTE24 knock-down reduces human cancer cell invasiveness. Our results disclose the ZMPSTE24-prelamin A system as an example of antagonistic pleiotropy on cancer and aging, support the potential of cell-based and systemic therapies for progeria, and highlight ZMPSTE24 as a new anticancer target.
 
Overall design We used siRNAs to silence ZMPSTE24 in different human cancer cell lines (SCC-40, SCC-2, A549 and MDA-MB-231), and compared their RNA expression profiles with those of mock treated cells. Each experimental condition (ZMPSTE24 or Scrambled siRNA) was performed in duplicate. Thus, a total of 16 array hybridizations were performed.
 
Contributor(s) de la Rosa J, Rad R, Bradley A, Cadiñanos J, López-Otín C
Citation(s) 23917225
Submission date Oct 23, 2012
Last update date Aug 13, 2018
Contact name Jorge de la Rosa
E-mail(s) jrs@degradome.uniovi.es
Organization name Instituto de Medicina Oncológica y Molecular de Asturias (IMOMA)
Street address Avda. Jose Maria Richard
City Oviedo
ZIP/Postal code 33193
Country Spain
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (16)
GSM1024464 SCC-40_siZMPSTE24_rep.1
GSM1024465 SCC-40_siZMPSTE24_rep.2
GSM1024466 SCC-40_siScramble_rep.1
Relations
BioProject PRJNA178213

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41799_RAW.tar 26.2 Mb (http)(custom) TAR
GSE41799_non-normalized_data.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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