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Series GSE41905 Query DataSets for GSE41905
Status Public on Oct 30, 2012
Title A global transcriptome analysis of keratinocytes upon suppression of endogenous microRNA-31
Organism Homo sapiens
Experiment type Expression profiling by array
Summary MiR-31 is one of the most highly overexpressed miRNAs in psoriasis skin; however, its biological role in the disease has not been studied. Here we show that miR-31 is markedly overexpressed in psoriasis keratinocytes. To study the biological role of miR-31 in keratinocytes, we transfected miR-31 hairpin inhibitor (anti-miR-31) into primary human keratinocytes to inhibit endogenous miR-31. We performed a global transcriptome analysis of keratinocytes upon suppression of endogenous miR-31 using Affymetrix arrays.
 
Overall design Expression profiling of primary human keratinocytes transfected with 10nM miR-31 hairpin inhibitor (anti-miR-31) or control hairpin RNA (anti-miR-Ctrl) for 48 hours (biological triplicates in each group) was performed using the Affymetrix GeneTitan system.
 
Contributor(s) Xu N, Meisgen F, Butler LM, Han G, Wang XJ, Söderberg-Nauclér C, Ståhle M, Pivarcsi A, Sonkoly E
Citation(s) 23233723
Submission date Oct 29, 2012
Last update date Nov 08, 2016
Contact name Ning Xu
Organization name Karolinska Institutet
Street address CMM L8:02
City Stockholm
ZIP/Postal code 17176
Country Sweden
 
Platforms (1)
GPL11532 [HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array [transcript (gene) version]
Samples (6)
GSM1027205 keratinocytes_anti-miR-31_rep1
GSM1027206 keratinocytes_anti-miR-31_rep2
GSM1027207 keratinocytes_anti-miR-31_rep3
Relations
BioProject PRJNA178462

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41905_RAW.tar 28.4 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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