NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE42535 Query DataSets for GSE42535
Status Public on May 20, 2014
Title Gene expression in cultured bovine ovarian granulosa
Organism Bos taurus
Experiment type Expression profiling by array
Summary The growth of the mammalian ovarian follicle requires the formation of a fluid filled antrum, and maturation and differentiation of the ovarian granulosa cells, largely under the control of Follicle Stimulating Hormone (FSH). Many follicles will regress and die by a process called atresia at this early antral stage. We therefore decided to analyse the gene expression profiles of granulosa cells cultured in the presence or absence of FSH and Tumour Necrosis Factor-alpha (TNFα), an apoptotic factor, to simulate the key influences. Different concentratons of FSH and TNFa in granulosa culture were used to determine effective conditions via estradiol and progesterone production, and cell number.
RNA for the array experiments and quantitative real time PCR was extracted from cells cultured with FSH added at 0.33 and TNFα at 50 ng/ml.
 
Overall design Four treatments of : (1) FSH alone, (2) TNFα alone, (3) FSH + TNFα and (4) control = neither drug, with replicates (n=4, except controls n=3 ) were used to generate RNA for the gene expression arrays (n=15)
 
Contributor(s) Hatzirodos N, Glister C, Katja H, Rodgers RJ, Knight PG
Citation(s) 24467805
Submission date Nov 27, 2012
Last update date May 20, 2014
Contact name Nicholas Hatzirodos
E-mail(s) nicholas.hatzirodos@adelaide.edu.au
Phone +61 8 8303 3371
Organization name Adelaide University
Department Obstetrics and Gynaecology
Lab Rodgers Lab
Street address Medical School Nth Frome Rd
City Adelaide
State/province SA
ZIP/Postal code 5005
Country Australia
 
Platforms (1)
GPL2112 [Bovine] Affymetrix Bovine Genome Array
Samples (15)
GSM1044361 Granulosa FSH rep3
GSM1044362 Granulosa TNFα rep4
GSM1044363 Granulosa TNFα rep3
Relations
BioProject PRJNA182222

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42535_RAW.tar 29.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap