|
| Status |
Public on Aug 23, 2013 |
| Title |
H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Genome binding/occupancy profiling by genome tiling array
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
23990607 |
| Submission date |
Dec 21, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Gillian Taylor |
| E-mail(s) |
G.C.A.Taylor@sms.ed.ac.uk
|
| Organization name |
IGMM
|
| Street address |
MRC HGU Crewe Road South
|
| City |
Edinburgh |
| ZIP/Postal code |
EH4 2XU |
| Country |
United Kingdom |
| |
|
| Platforms (7)
|
| GPL6887 |
Illumina MouseWG-6 v2.0 expression beadchip |
| GPL7202 |
Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) |
| GPL10787 |
Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
| GPL13276 |
NimbleGen Custom Mouse Hox Tiling Array |
| GPL17264 |
NimbleGen Custom Mouse Neuronal Tiling Array [120509_MM9_BHB_ChIP] |
|
| Samples (33)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE43099 |
Gain and loss of H4K16 acetylation during ES cell differentiation [NimbleGen ChIP-chip] |
| GSE43100 |
Profile of H4K16 acetylation in undifferentiated ES cells [Illumina BeadArray data] |
| GSE43101 |
Gain and loss of H4K16 acetylation during ES cell differentiation [Agilent arrays] |
| GSE43102 |
H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction (I) [ChIP-Seq] |
| GSE47716 |
H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction [Agilent array] |
| GSE47761 |
H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction (II) [ChIP-Seq] |
| GSE47762 |
H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction [NimbleGen array] |
|
| Relations |
| Affiliated with |
GSE66023 |
| BioProject |
PRJNA185197 |
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