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Series GSE43167 Query DataSets for GSE43167
Status Public on May 01, 2013
Title Small RNA analysis of ADAR1-knock down HeLa cells by RNAi
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Small RNA expression was analysed in total RNA of HeLa cells treated with siRNA toward Luciferase (negative cotrol) or ADAR1.
 
Overall design Small RNA: 2 samples examined: HeLa cell with siLuc (negative cotrol), with siADAR1
 
Contributor(s) Sakurai M, Gupta R, Nishikura K, Davuluri RV
Citation(s) 23622242
Submission date Dec 27, 2012
Last update date May 15, 2019
Contact name Kazuko Nishikura
Organization name The Wistar Institute
Department Gene Expression & Regulation
Street address 3601 Spruce Street
City Philadelphia
State/province Pennsylvania
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (2)
GSM1057798 Small RNA from HeLa cell total RNA treated with siLuc
GSM1057799 Small RNA from HeLa cell total RNA treated with siADAR1
This SubSeries is part of SuperSeries:
GSE43192 ADAR1 forms a complex with Dicer to promote microRNA processing and RNA-induced gene silencing
Relations
BioProject PRJNA184835
SRA SRP017699

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43167_RAW.tar 10.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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