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Series GSE43313 Query DataSets for GSE43313
Status Public on Aug 27, 2013
Title Effects of supernatants of USP2 knockdown HL-60 cells and mock transfected HL60 cells on differentiated 3T3-L1 cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Ubiquitin specifc protease (USP) 2 modulates various cellular responces including carcinogenesis, spermatogenesis, and glucose metabolism. So far, we established USP2 knockdown HL-60 cells to explore roles of USP2 in macrophages. In this experiment, we investigated whether USP2 knockdown HL-60 cells more prominently modulate function of adipocytes compared with control cells.
 
Overall design USP2 knock down(KD) HL-60 cells and mock vector-transfected mock control cells were differentiated into macrophage-like cells in the presence of 30nM of phorbol 12-myristate 13-acetate for 5 days. Subseqently, supernatants of the USP2 KD cells and control cells were added to differentiated 3T3-L1 cells for 3 and 6 hrs. Total RNA was isolated from the supernatant-treated 3T3-L1 cells, and subjected to microarray analysis. Duplicate samples were prepared for each cell and time point.
 
Contributor(s) Kitamura H, Shimamoto Y, Naoe Y
Citation(s) 24005904
Submission date Jan 07, 2013
Last update date Feb 02, 2018
Contact name Hiroshi Kitamura
E-mail(s) ktmr@rakuno.ac.jp
Phone 81-11-388-4781
Organization name Rakuno Gakuen University
Department School of Veterinary Medicine
Lab Laboratory for Veterinary Physiology
Street address 582 Midorimachi, Bunkyodai
City Ebetsu
ZIP/Postal code 069-8501
Country Japan
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (8)
GSM1060438 3h_control_treated_1
GSM1060439 3h_contro_treated_2
GSM1060440 3h_USP2KD_treated_1
Relations
BioProject PRJNA185411

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43313_RAW.tar 25.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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