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Series GSE43447 Query DataSets for GSE43447
Status Public on Jan 15, 2013
Title Evaluation of subsequent passaging on whole genome expression
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Heart diseases are as most leading causes of morbidity and mortality in the world. One of the promising approaches to cure these diseases is cell therapy using endogenous cardiac precursor cells resident in heart tissues. These cells are isolated from heart biopsies, cultured and passaged to reach to the desirable cell count necessary for transplantation. The process of cell propagation and subsequent passages may cause gene expression alteration unsuitable and dangerous for cell therapy; so in our study, we analyzed whole genome expression using microarray technology to compare expressed transcripts in 4 passages 6, 9, 12 and 15.
 
Overall design There were 4 different passage samples (6, 9, 12, and 15) each stage with three replicates. Replicates for passage 6 were determied as control group and the data was analyzed compaired to this passage.
 
Contributor(s) Vahdat S, Mousavi SA, Hajhosseini V, Abrari M, Gharechahi J, Aghdami N, Hosseinisalekdeh G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 11, 2013
Last update date Aug 13, 2018
Contact name SeyedAhmad Mousavi
E-mail(s) pcsam.2008@gmail.com
URL http://www.royaninstitute.org
Organization name Royan institute
Department Molecular systems biology
Lab Bioinformatics
Street address Bani hashem st - Resalat hw
City Tehran
State/province Tehran
ZIP/Postal code 16635-148
Country Iran
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM1062633 CPCs passage 6 rep1
GSM1062634 CPCs passage 6 rep2
GSM1062635 CPCs passage 6 rep3
Relations
BioProject PRJNA186437

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43447_RAW.tar 26.2 Mb (http)(custom) TAR
GSE43447_non-normalized.txt.gz 16.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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