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GEO accession:
Series GSE43451
Query DataSets for GSE43451
Status
Public on Feb 17, 2013
Title
Transcription forms and remodels supercoiling domains unfolding large scale chromatin structures
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by genome tiling array
Expression profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
23416946
Submission date
Jan 11, 2013
Last update date
Aug 16, 2018
Contact name
Nick Gilbert
E-mail(s)
Nick.Gilbert@ed.ac.uk
Organization name
The University of Edinburgh
Department
Institute of Genetics and Molecular Medicine
Street address
Crewe Rd South
City
Edinburgh
ZIP/Postal code
EH4 2XU
Country
United Kingdom
Platforms (3)
GPL6947
Illumina HumanHT-12 V3.0 expression beadchip
GPL16494
Agilent-028516 Custom human mapping supercoiling array (CN1)
GPL16498
Nimblegen_Human_720K_Chr11extra
Samples (41)
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More...
GSM1062645
RPE1_untreated_rep1
GSM1062646
RPE1_untreated_rep2
GSM1062647
RPE1_alpha-amanitin_5h_rep1
GSM1062648
RPE1_alpha-amanitin_5h_rep2
GSM1062649
RPE1_recovery_2h_rep1
GSM1062650
RPE1_recovery_2h_rep2
GSM1062651
RPE1_bleomycin_10min_rep1
GSM1062652
RPE1_bleomycin_10min_rep2
GSM1062653
RPE1_genomic-DNA_rep1
GSM1062654
RPE1_genomic-DNA_rep2
GSM1062655
RPE1_untreated_rep1
GSM1062656
RPE1_untreated_rep2
GSM1062657
RPE1_untreated_rep3
GSM1062658
RPE1_RNA_untreated_rep1
GSM1062659
RPE1_RNA_untreated_rep2
GSM1062660
RPE1_RNA-polII_ChIP_rep1
GSM1062661
RPE1_RNA-polII_ChIP_rep2
GSM1062662
RPE1_Topoisomerase_I_ChIP_rep1
GSM1062663
RPE1_Topoisomerase_I_ChIP_rep2
GSM1062664
RPE1_Topoisomerase_IIa_ChIP_rep1
GSM1062665
RPE1_Topoisomerase_IIa_ChIP_rep2
GSM1062666
RPE1_Topoisomerase_IIb_ChIP_rep1
GSM1062667
RPE1_Topoisomerase_IIb_ChIP_rep2
GSM1062668
RPE1_bleomycin_10min_rep1
GSM1062669
RPE1_bleomycin_10min_rep2
GSM1062670
RPE1_genomic-DNA_rep1
GSM1062671
RPE1_genomic-DNA_rep2
GSM1062672
RPE1_untreated_rep1
GSM1062673
RPE1_untreated_rep2
GSM1062674
RPE1_alpha-amanitin_5h_rep1
GSM1062675
RPE1_alpha-amanitin_5h_rep2
GSM1062676
RPE1_recovery_2h_rep1
GSM1062677
RPE1_recovery_2h_rep2
GSM1062678
RPE1_ICRF193_5h_rep1
GSM1062679
RPE1_ICRF193_5h_rep2
GSM1062680
RPE1_Camptothecin_5h_rep1
GSM1062681
RPE1_Camptothecin_5h_rep2
GSM1062682
RPE1_alpha-amanitin_ICRF193_5h_rep1
GSM1062683
RPE1_alpha-amanitin_ICRF193_5h_rep2
GSM1062684
RPE1_alpha-amanitin_Camptothecin_5h_rep1
GSM1062685
RPE1_alpha-amanitin_Camptothecin_5h_rep2
This SuperSeries is composed of the following SubSeries:
GSE43448
Transcription forms and remodels supercoiling domains unfolding large scale chromatin structures [NimbleGen ChIP-chip]
GSE43449
Transcription forms and remodels supercoiling domains unfolding large scale chromatin structures [Illumina transcription]
GSE43450
Transcription forms and remodels supercoiling domains unfolding large scale chromatin structures [Agilent ChIP-chip]
Relations
BioProject
PRJNA186442
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE43451_RAW.tar
869.1 Mb
(http)
(custom)
TAR (of PAIR, TXT)
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