|
| Status |
Public on Mar 02, 2013 |
| Title |
H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
23452851 |
| Submission date |
Jan 16, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Xiaolin Wu |
| E-mail(s) |
forestwu@mail.nih.gov
|
| Phone |
301-846-7677
|
| Organization name |
Frederick National Laboratory for Cancer Research/SAIC-Frederick Inc
|
| Department |
Cancer Research Technology Program
|
| Lab |
Genomics Laboratory
|
| Street address |
8560 Progress Drive, C3001
|
| City |
Frederick |
| State/province |
MD |
| ZIP/Postal code |
21701 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL6947 |
Illumina HumanHT-12 V3.0 expression beadchip |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (16)
|
| GSM1065010 |
RNAPII_ChIPSeq |
| GSM1065011 |
TAF3_Full_WT |
| GSM1065012 |
TAF3_Full_Mut |
| GSM1065013 |
TAF3_PHD_WT |
| GSM1065014 |
TAF3_PHD_Mut |
| GSM1065015 |
non-targeting siRNA control, no doxorubicin, rep1 |
| GSM1065016 |
TAF3 siRNA, no doxorubicin, rep1 |
| GSM1065017 |
non-targeting siRNA control, doxorubicin, rep2 |
| GSM1065018 |
TAF3 siRNA, doxorubicin, rep2 |
| GSM1065019 |
non-targeting siRNA control, no doxorubicin, rep3 |
| GSM1065020 |
TAF3 siRNA, no doxorubicin, rep3 |
| GSM1065021 |
non-targeting siRNA control, doxorubicin, rep4 |
| GSM1065022 |
TAF3 siRNA, doxorubicin, rep4 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE43539 |
H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation [ChIP-Seq] |
| GSE43540 |
H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation [HIT-Seq] |
| GSE43541 |
H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation [Illumina BeadArray] |
|
| Relations |
| BioProject |
PRJNA187168 |
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