|
| Status |
Public on Aug 04, 2013 |
| Title |
Genome-wide maps of HSF1 and HSF2 binding sites in cycling and mitotic human K562 cells in optimal growth conditions and upon heat stress |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Genome-wide characterization of binding sites for heat shock transcription factors HSF1 and HSF2 in freely cycling and mitotic K562 cells in optimal growth conditions and upon 30 min heat stress at 42C
|
| |
|
| Overall design |
Examination of HSF1 and HSF2 target loci in non-treated and heat treated K562 cells that are either unsynchronized (cycling) or synchronized to mitosis (mitotic). Input serves as background control, IgG is used as negative antibody control.
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| |
|
| Contributor(s) |
Vihervaara A, Sergelius C, Sistonen L |
| Citation(s) |
23959860 |
| Submission date |
Jan 17, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Anniina Vihervaara |
| E-mail(s) |
mavih@kth.se
|
| Phone |
+358 50 5463694
|
| Organization name |
KTH Royal Institute of Technology
|
| Department |
Gene Technology
|
| Lab |
Vihervaara
|
| Street address |
Tomtebodavägen 23A
|
| City |
Stockholm |
| ZIP/Postal code |
17165 |
| Country |
Sweden |
| |
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| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (14)
|
|
| Relations |
| BioProject |
PRJNA186755 |
| SRA |
SRP018017 |
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