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Series GSE43619 Query DataSets for GSE43619
Status Public on May 21, 2015
Title Activation of beta-catenin in hepatocellular carcinoma (HCC patients)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary CTNNB1 is the most frequently mutated gene in hepatocellular carcinoma (HCC). However, its clinical relevance remains controversial. We determined an evolutionarily conserved β-catenin signature by comparative analysis of gene expression data from human HCC and a mouse model (GSE43628). We generated gene expression data from the tumors of 88 HCC patients who underwent surgical resection as the primary treatment. We used these gene expression data to develop a new prognostification model for prognosis of HCC after surgery.
 
Overall design We generated gene expression data from the tumors of 88 HCC patients who underwent surgical resection as the primary treatment.
 
Contributor(s) Kim JH, Kang KJ, Lee JS, Park YY
Citation(s) 25661872
Submission date Jan 18, 2013
Last update date May 02, 2023
Contact name Sangbae Kim
E-mail(s) sangbkim22@gmail.com
Organization name Baylor Colleage of Medicine
Department HGSC
Street address 1 Baylor plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (88)
GSM979051 KM_001T
GSM979052 KM_008T
GSM979053 KM_009T
Relations
BioProject PRJNA186849

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43619_Clinical.data.csv.gz 1.6 Kb (ftp)(http) CSV
GSE43619_RAW.tar 26.2 Mb (http)(custom) TAR
GSE43619_T88_Raw.txt.gz 15.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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