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Series GSE43684 Query DataSets for GSE43684
Status Public on Jan 10, 2014
Title Gene expression profiling in cumulus cells (CC) derived from a modified natural and stimulated in vitro fertilization (IVF) procedures
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cumulus cells surrounding mature oocytes that developed to moruale/blastocyst stage on day 5 of IVF cycle were collected and used for gene expression profiling using Affymetrix Human Gene 1.0 ST Arrays in order to determine differences in gene expression between the modified natural and stimulated in vitro fertilization (IVF) procedures.
 
Overall design Microarray analysis was made on 8 individual CC samples, derived from 5 patients that first underwent MNIVF, followed by a controlled ovarian hyperstimulation (COH) cycle. As the quality of the isolated RNA derived from 2 of the MNIVF CC samples was not good, these samples were not included in the analysis. Altogether, 3 CC samples from MNIVF and 5 CC samples from COH cycles were included in microarray analysis.
 
Contributor(s) Burnik Papler T, Fon Tacer K, Devjak R, Juvan P, Virant Klun I, Vrtačnik Bokal E
Citation(s) 24221912
Submission date Jan 23, 2013
Last update date Jul 26, 2018
Contact name Peter Juvan
Phone +386 1 543 7595
Organization name Faculty of Medicine, University of Ljubljana
Department Institute of Biochemistry
Lab Center for Functional Genomics and Bio-Chips
Street address Zaloska 4
City Ljubljana
ZIP/Postal code SI-1000
Country Slovenia
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM1068180 COH, patient AH
GSM1068181 COH, patient AU
GSM1068182 COH, patient D
Relations
BioProject PRJNA187053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43684_RAW.tar 33.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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