|
| Status |
Public on Aug 01, 2013 |
| Title |
Identification of SF-1 genomic binding sites in conditions of basal and increased dosage in the H295R adrenocortical tumor cell line |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
The goal of this study was to identify genomic binding sites of the SF-1 nuclear receptor under conditions of basal and increased dosage in the H295R human adrenocortical tumor cell line.
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| |
|
| Overall design |
14 samples: input DNA (2 replicates) - SF-1 ChIP Millipore antibody basal SF-1 dosage (3 replicates) - SF-1 ChIP Millipore antibody increased SF-1 dosage (3 replicates) - SF-1 ChIP Perseus antibody basal SF-1 dosage (3 replicates) - SF-1 ChIP Perseus antibody increased SF-1 dosage (3 replicates)
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| |
|
| Contributor(s) |
Lalli E |
| Citation(s) |
23907384 |
| Submission date |
Feb 11, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Enzo LALLI |
| E-mail(s) |
ninino@ipmc.cnrs.fr
|
| Phone |
+33 (0)4 93 95 77 55
|
| Organization name |
IPMC
|
| Department |
CNRS UMR 7275
|
| Lab |
402
|
| Street address |
660 route des Lucioles
|
| City |
Valbonne |
| ZIP/Postal code |
06560 |
| Country |
France |
| |
|
| Platforms (2) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (5)
|
| GSM1080947 |
ChIP-seq_Millipore Ab_basal SF-1 (reps 1-3) |
| GSM1080948 |
ChIP-seq_Millipore Ab_overexpressed SF-1 (reps 1-3) |
| GSM1080949 |
ChIP-seq_Perseus Ab_basal SF-1 (reps 1-3) |
|
| This SubSeries is part of SuperSeries: |
| GSE44224 |
Mechanisms of dosage-dependent regulation of gene expression by transcription factor SF-1 |
|
| Relations |
| BioProject |
PRJNA189199 |
| SRA |
SRP018548 |
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